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Publications: 601 - 700

601."Two-dimensional vibrational lineshapes of amide III, II, I, and A bands in a helical peptide"
T. Hayashi and S. Mukamel
J. Mol. Liq., 141, 149-154 (2008)
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602."Coherent Manipulation of Quadrupole Bi-Excitons in Cuprous Oxide by 2D Femtosecond Spectroscopy"
O. Roslyak, U. Aparajita, J.L. Birman, and S. Mukamel
Physica Status Solidi (b), 249, 435-447 (2012)
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605."Coherent multidimensional vibrational spectroscopy of biomolecules: concepts, simulations and challenges"
W. Zhuang, T. Hayashi, and S. Mukamel
Angew. Chem. Int. Ed. 48, 3750 (2009)
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606."Single-electron counting spectroscopy: simulation study of porphyrin in a molecular junction"
S.Welack, J.B. Maddox, M. Esposito, U. Harbola, and S. Mukamel
Nano. Lett., 8, 1137 (2008)
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607."Coherent 2D spectroscopy of a cyclic decapeptide antamanide: A simulation study of the amide-I and amide-A bands"
C. Falvo, T. Hayashi, W. Zhuang, and S. Mukamel
J. Phys. Chem. B 112, 12479 (2008)
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608."Probing multiple core-hole interactions in the nitrogen k-edge of DNA basepairs by multidimensional attosecond X-ray spectroscopy: A simulation study"
D. Healion, I. Schweigert, and S. Mukamel
J. Phys. Chem. A 112, 11449 (2008)
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609."Tracing exciton dynamics in molecular nanotubes with 2D electronic spectroscopy"
A. Nemeth, F. Milota, J. Sperling, D. Abramavicius, S. Mukamel, and H.F. Kauffmann
Chem. Phys. Lett. 469, 130 (2009)
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611."Discriminating early state AB42 monomer structures using chirality-induced 2DIR spectroscopy: A simulation study"
W. Zhuang, N.G. Sgourakis, Z. Li, A. Garcia, and S. Mukamel
PNAS 107, 15687 (2010).
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612."Phase-space algorithm for simulating quantum nonlinear response functions of bosons using stochastic classical trajectories"
B. Palmieri, Y. Nagata, and S. Mukamel
Phys. Rev. E 82, 046706 (2010).
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614."Interplay of slow bath fluctuations and energy transfer in 2D spectroscopy of the FMO light-harvesting complex: Benchmarking of simulation protpcols"
B. Palmieri, D. Abramavicius, and S. Mukamel
Phys. Chem. Chem. Phys. 12, 108 (2010).
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615."Dissecting quantum pathways in two-dimensional correlation spectroscopy of semiconductors"
L. Yang and S. Mukamel
J. Phys.:Condens. Matter, 20, 395202 (2008)
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616."Waiting time distributions of electron transfers through quantum dot Aharonov-Bohm interferometers"
S. Welack, S. Mukamel, and Y. Yan
Euro. Phys. Lett. 85, 57008 (2009)
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617."Exciton delocalization and transport in photosystem I of cyanobacteria synechococcus elongates: Simulation study of coherent two-dimensional optical signals"
D. Abramavicius and S. Mukamel
J. Chem. Phys. B 113, 6097 (2009)
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618."Generalized Kramers-Heisenberg expressions for stimulated Raman scattering and two-photon absorption"
O. Roslyak, C. Marx, and S. Mukamel
Phys. Rev. A 79, 063827 (2009)
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619."Double-quantum-coherence attosecond x-ray spectroscopy of spatially-separated, spectrally-overlapping core-electron transitions"
I.V. Schweigert and S. Mukamel
Phys. Rev. A 78, 052509 (2008)
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620."Multidimensional pump-probe spectroscopy with entangled twin-photon states,"
O. Roslyak and S. Mukamel
Phys. Rev. A 79, 063409 (2009)
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621."Coherent infrared multidimensional spectra of the OH Stretching band in liquid water simulated by direct nonlinear exciton propagation"
C. Falvo, B. Palmieri, and S. Mukamel
J. Chem. Phys. 130, 184501 (2009)
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622."Coherent control of chirality-induced 2D electronic spectroscopy signals"
D. Voronine, D. Abramavicius and S. Mukamel
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, 550-552 (2008)
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623."Probing anomalous spectral diffusion and exciton fluctuations by coherent multidimensional spectroscopy"
F. Sanda and S. Mukamel
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, 959-961 (2008).
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624."Double-quantum coherent spectroscopy of chromophore aggregates"
D. Abramavicius and S. Mukamel
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, 412-414 (2008).
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625."Dissecting exciton dyanmics pathways in electronic multidimensional spectroscopy by pulse polarizations"
D. Abramavicius, D. Voronine and S. Mukamel
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, 601-603 (2008).
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626."Extracting single and two-exciton couplings in photosynthetic complexes by coherent two-dimensional electronic spectra"
D. Abramavicius, B. Palmieri, and S. Mukamel
Chem. Phys. 357, 79 (2009)
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627."A unified description of sum frequency generation, parametric down conversion and two photon fluoresence"
O. Roslyak and S. Mukamel
Mol. Phys. 107, 265 (2009)
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628."Isolating excitonic Raman coherence in semiconductors using two-dimensional correlation spectroscopy"
L.Yang, T. Zhang, A. Bristov, S. Cundiff, and S. Mukamel
J.Chem. Phys. 129, 234711 (2008)
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629."Nonlinear spectroscopy with entangled photons: Manipulating quantum pathways of matter"
O. Roslyak, C.A. Marx, and S. Mukamel
Phys. Rev. A 79, 033832 (2009)
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630."Controlling multidimensional off-resonant-Raman and infrared vibrational spectroscopy by finite pulse bandshapes"
S. Mukamel
J. Chem. Phys. 130, 054110 (2009)
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631."Waiting time distributions of electron transfers through quantum dot Aharonov-Bohm interferometers"
S. Welack, S. Mukamel and Y. Yujing
Euro. Phys. Lett. 85, 57008 (2009)
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632."Exciton coherence length fluctuations in chromophere aggregates probed by multidimenional optical spectroscopy"
F. Sanda, V. Perlik, and S. Mukamel
J. Chem. Phys. 133, 014102 (2010)
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634."Coherent stimulated x-ray Raman spectroscopy; attosecond extesion of resonant inelastic x-ray Raman scattering"
U. Harbola and S. Mukamel
Phys. Rev. B 79, 085108 (2009)
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635."Photon entanglement signatures in difference-frequency-generation"
O. Roslyak and S. Mukamel
Opt. Exp. 17, 1093 (2009)
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636."Sensitivity of 2DIR spectra to peptide helicity: A concerted experimental and simulation study of an octopeptide"
N. Sengupta, H. Maekawa, W. Zhuang, C. Toniolo, S. Mukamel, D.J. Tobias, and N.H. Ge
J. Phys. Chem. B 113, 12037 (2009)
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637."Excitonic couplings and interband energy transfer in a double-wall molecular aggregate imaged by coherent two-dimensional electronic spectroscopy "
F. Milota, J. Sperling, A. Nemeth, D. Abramavicius, S. Mukamel, and H.F. Kauffmann
J. Chem. Phys. 131, 054510 (2009)
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639."Two-dimensional electric double-quantum coherence spectroscopy"
J. Kim, S. Mukamel, and G.D. Scholes
Acc. Chem. Res. 42, 1375 (2009)
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640."Lindblad equations for strongly coupled populations and coherences in photosynthetic complexes"
B. Palmieri, D. Abramavicius, and S. Mukamel
J. Chem. Phys. 130, 204512 (2009)
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642."Gaussian phase-space representation of fermion dynamics: Beyond the time-dependent Hartree-Fock approximation"
S. Rahav and S. Mukamel
Phys. Rev. B 79, 165103 (2009)
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643."Investigation of electronic coupling in semiconductor double quantum wells using coherent optical two-dimensional Fourier transform spectroscopy"
X. Li, T. Zhang, S. Mukamel, R.P. Mirin, and S.T. Cundiff
Solid State Comm. 149, 361 (2009)
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644."Probing excitons and bioexcitons in coupled quantum dots by coherent two-dimensional optical spectroscopy"
E.G. Kavousanaki, O. Roslyak, and S. Mukamel
Phy. Rev. B 79, 155324 (2009)
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645."Many-body Green's function approach to attosecond nonlinear X-ray spectroscopy"
U. Harbola and S. Mukamel
Phys. Rev. B 79, 235129 (2009)
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646."Nonlinear response of vibrational excitons: Simulating the two-dimensional infrared spectrum of liquid water"
A. Paarmann, T. Hayashi, S. Mukamel, and R.J.D. Miller
J. Chem. Phys. 130, 204110 (2009)
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647."2D-IR experiments and simulations of the coupling between amide-I and ionizable side chains in proteins: applications to the villin headpiece"
S. Bagchi, C. Falvo, S. Mukamel, and R.M. Hochstrasser
J. Phys. Chem. B 113, 11260 (2009)
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648."Optical pump-probe spectroscopy using strongly chirped laser pulses: pushing the temporal resolution beyond the pulse duration"
D. Polli, D. Brida, S. Mukamel, G. Lanzanii, and G. Cerullo
submitted,.
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649."Exciton disorder in molecular nanotubes: A 2D electronic spectroscopy study and first comparison to a microscopic model"
J.Sperling, A. Nemeth, J. Hauer, D. Abramavicius, S. Mukamel, H.F. Kauffmann, and F. Milota
submitted.
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650."Manupulating stimulated coherent anti-Stokes Raman spectroscopy signals by broad-band and narrow-band pulses,"
S. Rahav, O. Roslyak, and S. Mukamel
J. Chem. Phys. 131, 194510 (2009)
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651."Two-quantum many-body coherences in two-dimensional Fourier-transform spectra of exciton resonances in semiconductor quantum wells"
D. Karaiskaj, A.D. Bristow, L. Yang, X. Dai, R.P. Mirin, S. Mukamel, and S.T. Cundiff
Phys. Rev. Lett. 104, 117401 (2010)
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652."Suppression of photon-echo as a signature of chaos"
M. Kryvohuz, J.S. Cao, and S. Mukamel
J. Phys. Chem. B 112, 15999 (2008)
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653."Combining Nanooptical fields and Coherent Spectroscopy on Systems with Delocalized Excitons"
M. Richter, F. Schlosser, M. Schoth S. Burger, F. Schmidt, A. Knorr, and S. Mukamel
Ultrafast Phenomena and Nanophotonics XVI Conference, SPIE OPTO, 25 Jan 2012
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655."Signatures of Three-exciton Correlations in the Coherent and Incoherent Nonlinear Optical Response of Photosynthetic Complexes,"
L. Yang, D. Abramavicius, and S. Mukamel
New J. Phys. 12, 065046 (2010)
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656."Coherent multidimensional optical spectroscopy"
S. Mukamel, Y. Tanimura, and P. Hamm
Acc. Chem. Res. 42, 1207 (2009)
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657."Stimulated coherent anti-Stokes Raman spectroscopy (CARS) resonances originate from double-slit interference of two-photon Stokes pathways"
S. Rahav and S. Mukamel
PNAS 107, 4825 (2010)
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658."Frequency Distribution of the Amide-I Vibration in Amyloid Fibrils revealed by 2D-IR measurements and Simulations"
C. Falvo, W. Zhuang, Y.S. Kim, P.H.Axelsen, R.M. Hochstrasser and S. Mukamel
J. Phys. Chem. B, 116, 3322-3330 (2012)
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659."Ultrafast Nonlinear Optical Signals Viewed from the Molecules Perspective: Kramers-Heisenberg Transition Amplitudes vs. Susceptibilities"
S. Rahav and S. Mukamel
Adv. Atom. Mol. Opt. Phys. 59, 223-263 (2010)
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660."Multidimensional Measures of Impulsively Driven Stochastic Systems Based on the Kullback-Leibler Distance"
S. Rahav and S. Mukamel
Phys. Rev. E 81, 031116 (2010)
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661."Simulation and Visualization of Attosecond Stimulated Raman X-ray Spectroscopy (SXRS)Signals in trans-NMA at the Nitrogen & Oxygen K-edges"
D. Healion, H. Wang and S. Mukamel
J. Chem. Phys. 134, 124101 (2011)
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662."Probing the folding of mini-protein beta3s by 2D infrared spectroscopy: Simulation study"
C.N.J. Marai, S. Mukamel, and J. Wang
PMC Biophys. 3, 8 (2010)
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663."Spontaneous and stimulated coherent and incoherent nonlinear wave-mixing and hyper-raleigh scattering"
O. Roslyak and S. Mukamel
Lectures of virtual university, Max-Born Institute, EVU lecture notes
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664."Manipulating quantum entanglement of quasiparticles in many electron systems by attosecond X-ray pulses"
S. Mukamel and H. Wang
Phys. Rev. A 81, 062334 (2010)
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665."Multidimensional attosecond photoelectron spectroscopy with shaped pulses and quantum optical fields"
S. Rahav and S. Mukamel
Phys. Rev. A 81, 063810 (2010)
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666."Simulation study of chiral two dimensional ultraviolet (2DUV) spectroscopy of the protein backbone"
D. Abramavicius, J. Jiang, B.M. Bulheller, J.D. Hirst, and S. Mukamel
J. Am. Chem. Soc. 132, 7769 (2010)
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667."Ultraviolet spectroscopy of protein backbone transitions in aqueous solution: QM and MM simulations"
J. Jiang, D. Abramavicius, B.M. Bulheller, J.D. Hirst, and S. Mukamel
J. Phys. Chem. B 114, 8270 (2010)
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668."Simulation of two-dimensional ultraviolet spectroscopy of amyloid fibrils"
J. Jiang, D. Abramavicius, C. Falvo, B.M. Bulheller, J.D. Hirst, and S. Mukamel
J. Phys. Chem. B 114, 12150 (2010)
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669."Probing many-particle correlations in semiconductor quantum wells using double-quantum-coherence signals"
L. Yang and S. Mukamel
Proc. of SPIE 7600, 76001 (2010)
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670."Three-pulse echo peak shift spectroscopy of disordered semiconductor quantum wells and dense atomic vapors"
S.T. Cundiff, V.O. Lorenz, S.G. Carter, Z. Chen, S. Mukamel, and W. Zhuang
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, P253
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671."Ultrafast coherent interactions in Quantum wells studied by two-dimensional Fourier transform spectroscopy"
T. Zhang, I. Kuznetsova, L. Yang, A.D. Bristow , X. Dai, X. Li, T. Meier, P. Thomas, S. Mukamel, R.P. Mirin, and S.T. Cundiff
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, P247
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672."Probing intermolecular couplings in simulations of the two-dimensional infrared photon echo spectrum of liquid water"
A. Paarmann, T. Hayashi, S. Mukamel, and R.J.D. Miller
In Ultrafast Phenomena XVI, P. Corkum, S. De Silvestri, K. Nelson, E. Riedle and R. Schoenlein, Springer Verlag, P469
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673."The proton momentum distribution in strongly H-bonded phases of water: A critical test of electrostatic models"
C.J. Burnham, G.F. Reiter, T. Hayashi, S. Mukamel, and R.L. Napoleon
in preparation
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675."Vibrational sum-frequency generation spectroscopy at the water/lipid interface: Molecular dynamics simulation study"
Y. Nagata and S. Mukamel
J. Am. Chem. Soc. 132, 6434-6442 (2010)
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676."Quantum oscillatory exciton migration in photosynthetic reaction centers"
D. Abramavicius and S. Mukamel
J. Chem. Phys. 133, 064510 (2010)
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677."Relaxation processes in systems strongly coupled to a harmonic bath"
M. Richter and S. Mukamel
J. Mod. Opt. 1 (2010)
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678."Signatures of quasiparticle entanglement in multidimensional nonlinear optical spectroscopy of aggregates"
S. Mukamel
J. Chem. Phys. 132, 1241105 (2010).
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680."Two-Photon Coincidence Fluorescence Spectra of Cavity Multi-Polaritons; Novel Signatures of Carrier Multiplication"
O. Roslyak, G. Gumbs, G. Godfrey and S. Mukamel
Nanoletters. 10, 4253-4259 (2010)
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682."Ultrafast double-quantum-coherence spectroscopy of excitons with entangled photons"
M. Richter and S. Mukamel
Phys. Rev. A 82, 013820 (2010).
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685."Signatures of Quantum Exciton Transport in 2D Coherent Optical Signals of Photosynthetic Complexes"
D. Abramavicius and S. Mukamel.
In Ultrafast Phenomena XVII (Oxford University Press, New York),Pages 616-618 (2010).
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686."Energy-transfer and charge-separation pathways in the reaction center of photodydtem II revealed by coherent 2D optical spectroscopy"
D. Abramavicius and S. Mukamel
J. Chem. Phys. 133, 184501 (2010).
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687."Optically Excited Entangled States in Organic Molecules Illuminate the Dark"
L. Upton, M. Harpham, O. Suzer, M. Richter, S. Mukamel and T. Goodson III
J.Phys.Chem Lett, 4, 2046-2052 (2013).
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688."Multidimensional phase-sensitive single-molecule spectroscopy with time-and-frequency-gated fluorescence detection"
S. Mukamel and M. Richter
Phys. Rev. A 83, 013815 (2011).
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689."Direct Evidence of Quantum Transport in Photosynthetic Light Harvesting Complexes"
G. Panitchayangkoon, D.V. Voronine, D. Abramavicius, S. Mukamel and G. S. Engel
PNAS. 108, 20908-20912 (2011).
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690."Multidimensional optical spectroscopy of a single molecule in a current-carrying state"
S. Rahav and S. Mukamel
J. Chem. Phys. 133, 244106 (2010).
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691."Two-dimensional ultraviolet (2DUV) spectroscopic tools for identifying fibrillation propensity of protein pesidue sequences"
J. Jiang and S. Mukamel
Angew. Chem. In. Ed. 49, 9666 (2010).
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692."Spectral diffusion at the water/lipid interface revealed by two-dimensional fourth-order optical spectroscopy: A classical simulation study"
Y. Nagata and S. Mukamel
J. Am. Chem. Soc. 133, 3276 (2011).
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693."Two-dimensional near-ultraviolet spectroscopy of aromatic residues in amyloid fibrils: A first principles study"
J. Jiang and S. Mukamel
Phys. Chem. Chem. Phys. 13, 2394 (2011).
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694. "Quantum field, interference, and entanglement effects in nonlinear optical spectroscopy"
S. Mukamel and Y. Nagata
22nd Solvay Conference in Chemistry, Procedia Chemistry 00 1-20 (2011).
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695."Collective Two-Particle Resonances Induced by Photon Entanglement"
M. Richter, S. Mukamel
Phys.Rev. A, 83, 063805 (2011).
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696."Exciton Dynamics in Chromophone Aggregates with Correlated Environment Fluctuations"
D. Abramavicius, S. Mukamel
J. Chem. Phys.134, 174504(2011).
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697."Coherent Control Protocol for Separating Energy Transfer Pathways in Photosynthetic Complexes by Chiral Multidimensional Signals"
D. Voronine, D. Abramavicius, S. Mukamel
Phys. Chem. Chem. Phys. 13, 2394 (2011).
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700."Signatures of carrier multiplication in the frequency resolved fluorescence spectra from polaritons"
O. Roslyak, G. Gumbs, and S. Mukamel
J. Mod. Opt. 57, 2009 (2010).
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